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1

How do thermophilic proteins resist aggregation?

Anthony Mary Thangakani, Sandeep Kumar, Devadasan Velmurugan, Maria Siluvay Michael Gromiha

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2012

Language:

english

File:

PDF, 1.16 MB

english, 2012

2

Distinct position-specific sequence features of hexa-peptides that form amyloid-fibrils: application to discriminate between amyloid fibril and amorphous β-aggregate forming peptide sequences

A Mary Thangakani, Sandeep Kumar, D Velmurugan, M Michael Gromiha

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 443 KB

english, 2013

3

GAP: towards almost 100 percent prediction for -strand-mediated aggregating peptides with distinct morphologies

Thangakani, A. M., Kumar, S., Nagarajan, R., Velmurugan, D., Gromiha, M. M.

Journal:

Year:

2014

Language:

english

File:

PDF, 378 KB

english, 2014

4

A Statistical Method for Predicting Protein Unfolding Rates from Amino Acid Sequence

Gromiha, M. Michael, Selvaraj, S., Thangakani, A. Mary

Journal:

Journal of Chemical Information and Modeling

Year:

2006

Language:

english

File:

PDF, 67 KB

english, 2006

5

ROLE OF MEDIUM- AND LONG-RANGE INTERACTIONS TO THE STABILITY OF THE MUTANTS OF T4 LYSOZYME

Gromiha, M. Michael, Thangakani, A. Mary

Journal:

Preparative Biochemistry & Biotechnology

Year:

2001

Language:

english

File:

PDF, 219 KB

english, 2001

6

TMFunction: database for functional residues in membrane proteins

Gromiha, M. M., Yabuki, Y., Suresh, M. X., Thangakani, A. M., Suwa, M., Fukui, K.

Journal:

Nucleic Acids Research

Year:

2009

Language:

english

File:

PDF, 2.72 MB

english, 2009

7

FOLD-RATE: prediction of protein folding rates from amino acid sequence

Gromiha, M. M., Thangakani, A. M., Selvaraj, S.

Journal:

Nucleic Acids Research

Year:

2006

Language:

english

File:

PDF, 494 KB

english, 2006

8

Autoimmune Responses to Soluble Aggregates of Amyloidogenic Proteins Involved in Neurodegenerative Diseases: Overlapping Aggregation Prone and Autoimmunogenic regions

Kumar, Sandeep, Thangakani, A. Mary, Nagarajan, R., Singh, Satish K., Velmurugan, D., Gromiha, M. Michael

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.75 MB

english, 2016

9

Identification of type I and type II inhibitors of c-Yes kinase using in silico and experimental techniques

Ramakrishnan, Chandrasekaran, Mary Thangakani, Anthony, Velmurugan, Devadasan, Anantha Krishnan, Dhanabalan, Sekijima, Masakazu, Akiyama, Yutaka, Gromiha, M. Michael

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2017

Language:

english

File:

PDF, 2.07 MB

english, 2017

10

An iterative compound screening contest method for identifying target protein inhibitors using the tyrosine-protein kinase Yes

Chiba, Shuntaro, Ishida, Takashi, Ikeda, Kazuyoshi, Mochizuki, Masahiro, Teramoto, Reiji, Taguchi, Y-h., Iwadate, Mitsuo, Umeyama, Hideaki, Ramakrishnan, Chandrasekaran, Thangakani, A. Mary, Velmuruga

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 3.12 MB

english, 2017

11

PDBparam: Online Resource for Computing Structural Parameters of Proteins

Nagarajan, R., Archana, A., Thangakani, A. Mary, Jemimah, S., Velmurugan, D., Gromiha, M. Michael

Journal:

Bioinformatics and Biology Insights

Year:

2016

Language:

english

File:

PDF, 1.86 MB

english, 2016

12

CPAD, Curated Protein Aggregation Database: A Repository of Manually Curated Experimental Data on Protein and Peptide Aggregation

Thangakani, A. Mary, Nagarajan, R., Kumar, Sandeep, Sakthivel, R., Velmurugan, D., Gromiha, M. Michael, Zheng, Jie

Journal:

Year:

2016

Language:

english

File:

PDF, 451 KB

english, 2016